RNA bias paper

Errors in RNA-Seq quantification affect genes of relevance to human disease

Christelle Robert1 and Mick Watson

1 The Roslin Institute and Royal (Dick) School of Veterinary studies, University of Edinburgh, Easter Bush, EH25 9RG

2 Edinburgh Genomics, The Roslin Institute, University of Edinburgh, Easter Bush, EH25 9RG

 

Supporting files and information

Global simulated reads: read1 read2

Problematic simulated reads: read1 read2

GTF for 19654 genes: GTF

cDNA sequences (FASTA) for 19654 genes: cDNA

 

Code

Code is being uploaded to GitHub: https://github.com/mw55309/RNAfreak

 

Re-analysis of Mouse lung cancer data

Read counts from htseq-count: download

Mouse exon BED file: download

MMG counts: download